Welcome to the Genome Toolbox! I am glad you navigated to the blog and hope you find the contents useful and insightful for your genomic needs. If you find any of the entries particularly helpful, be sure to click the +1 button on the bottom of the post and share with your colleagues. Your input is encouraged, so if you have comments or are aware of more efficient tools not included in a post, I would love to hear from you. Enjoy your time browsing through the Toolbox.
Monday, June 17, 2013
Index FASTA File
Some programs require indexed FASTA files (*.fa.fai files). Indexing a FASTA file is easy to do with Samtools. Just run the below script on your FASTA file.
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